Model constructors

Functions to create the foundation of a model.

model()

General model

pk_model()

Create a PK model

Parameter models

Building blocks defining parameters

prm_log_normal()

Parameter with log-normal distribution

prm_logit_normal()

Parameter with logit-normal distribution

prm_no_var()

Parameter without variability

prm_normal()

Parameter with normal distribution

Observation models

Building blocks defining observations

obs_additive()

Observation with additive error

obs_combined()

Observation with combined error

obs_proportional()

Observation with proportional error

Compartments

Building blocks to define compartments and flows

compartment() cmp()

Compartment

flow()

Flow between compartments

Algebraics & variables

Building blocks to specify algebraic relationships and input variables

algebraic()

Algebraic relationship

input_variable() dataset()

Input variables

PK components

Building blocks to define pharmacokinetic components

pk_absorption_fo()

PK absorption first-order

pk_absorption_fo_lag()

PK absorption first-order, lag-time

pk_absorption_fo_transit()

PK absorption first-order, transit compartment

pk_absorption_fo_zo()

PK absorption first-order, zero-order delay

pk_absorption_zo()

PK absorption zero-order

pk_absorption_zo_lag()

PK absorption zero-order, lag-time

pk_distribution_1cmp()

PK distribution 1 compartment

pk_distribution_2cmp()

PK distribution 2 compartments

pk_distribution_3cmp()

PK distribution 3 compartments

pk_elimination_linear()

PK elimination linear

pk_elimination_linear_nl()

PK elimination linear & nonlinear

pk_elimination_nl()

PK elimination nonlinear

pk_model()

Create a PK model

Checking & Rendering

Check a model and converting it into code

check()

Checking for issues

render()

Generate model code

assemblerr_options()

Options

Model tasks

Specifying model tasks

tsk_estimation()

Task estimation

tsk_output() tsk_output_xpose4()

Task output

vars_prms() vars_data() vars_eta() vars_nm_std() vars_starts_with() vars_matches()

Selecting model variables