Quickly import NONMEM output files into R.

read_nm_files(
runno = NULL,
prefix = "run",
ext = c(".ext", ".cor", ".cov", ".phi", ".grd", ".shk"),
file = NULL,
dir = NULL,
quiet = FALSE
)

## Arguments

runno Run number to be evaluated. Prefix of the model file names. A vector of the file extension to import. By default '.ext', '.cor', '.cov', '.phi', '.grd', '.shk' files are listed. Names of the model output file to be imported. Alternative argument to prefix, runno and ext. Location of the model files. Logical, if FALSE messages are printed to the console.

## File path generation

The rules for model file names generation are as follow:

• with runno: the full path is generated as <dir>/<prefix><runno>.<ext> e.g. with dir = 'model/pk', prefix = 'run', runno = '001', ext = '.lst' the resulting path would be model/pk/run001.lst

• with file: the full path is generated as <dir>/<file> e.g. with dir = 'model/pk', file = 'run001.lst' the resulting path would also be model/pk/run001.lst. Note: in this case the file extension should be provided as part of the file argument.

xpose_data, read_nm_tables
if (FALSE) {
# Using the file argument to import a model file:
# Using the runno argument to import a model file:
}